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Methodology article
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate visualization
Cheng K, Law N, Siu W, Liew A
BMC Bioinformatics, 2008 9:210 (23 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/210/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-210.pdf
Methodology article
Discovering biclusters in gene expression data based on high-dimensional linear geometries
Gan X, Liew A, Yan H
BMC Bioinformatics, 2008 9:209 (23 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/209/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-209.pdf
Methodology article
Conserved co-expression for candidate disease gene prioritization
Oti M, van Reeuwijk J, Huynen M, Brunner H
BMC Bioinformatics, 2008 9:208 (23 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/208/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-208.pdf
PubMed
http://www.biomedcentral.com/pubmed/18433471
Software
Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
Katoh K, Toh H
BMC Bioinformatics, 2008 9:212 (25 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/212/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-212.pdf
Software
VariVis: a visualisation toolkit for variation databases
Smith T, Cotton R
BMC Bioinformatics, 2008 9:206 (23 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/206/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-206.pdf
PubMed
http://www.biomedcentral.com/pubmed/18430251
Software
GAPscreener: An Automatic Tool for Screening Human Genetic Association Literature in PubMed Using the Support Vector Machine Technique
Yu W, Clyne M, Dolan S, Yesupriya A, Wulf A, Liu T, Khoury M, Gwinn M
BMC Bioinformatics, 2008 9:205 (22 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/205/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-205.pdf
PubMed
http://www.biomedcentral.com/pubmed/18430222
Correction
Correction: Extracting unrecognized gene relationships from the biomedical literature via matrix factorizations
Kim H, Park H, Drake B
BMC Bioinformatics, 2008 9:211 (24 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/211/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-211.pdf
Research article
M-BISON: microarray-based integration of data sources using networks
Daigle B, Altman R
BMC Bioinformatics, 2008 9:214 (25 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/214/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-214.pdf
Research article
A new protein linear motif benchmark for multiple sequence alignment software
Perrodou E, Chica C, Poch O, Gibson T, Thompson J
BMC Bioinformatics, 2008 9:213 (25 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/213/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-213.pdf
Research article
Extraction of semantic biomedical relations from text using conditional random fields
Bundschus M, Dejori M, Stetter M, Tresp V, Kriegel H
BMC Bioinformatics, 2008 9:207 (23 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/207/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-207.pdf
Research article
Major copy proportion analysis of tumor samples using SNP arrays
Li C, Beroukhim R, Weir B, Winckler W, Garraway L, Sellers W, Meyerson M
BMC Bioinformatics, 2008 9:204 (21 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/204/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-204.pdf
PubMed
http://www.biomedcentral.com/pubmed/18426588
Research article
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
Zhang Y, Xuan J, de los Reyes B, Clarke R, Ressom H
BMC Bioinformatics, 2008 9:203 (21 April 2008)
Abstract
http://www.biomedcentral.com/1471-2105/9/203/abstract
Provisional PDF http://www.biomedcentral.com/content/pdf/1471-2105-9-203.pdf
PubMed
http://www.biomedcentral.com/pubmed/18426580
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